This may or may not relate.... when I got my new bottom end, they just put in 10w30 dino oil. I broke in the engine sort of as described here
http://www.mototuneusa.com/break_in_secrets.htm
I say sort of cause I had about 40 miles on the clock when I found out about it. I don't know what all went on with your rebuild, so I don't know whether to advocate that procedure or not to you.
Incidentally, at 500 miles I changed the oil again and put in straight 30 weight with this stuff called Hyperlube. It's FANTASTIC. I wasn't expecting any kind of power boost from it, I just got it cause it was cheaper than napa oil and a couple gearhead/racer friends recommended it for antisludge and wear protection. Couple days after the change I was driving and it just struck me, "man, my car is more powerful all of a sudden." Came to realize that the bottle gave mention of potential power increase. I swear, I've got like 10 more horsies under the hood with this stuff.