Alright so here is where were at.........
We gave up and took the car to the mechanic we couldn't start it with the keys so we used a piece of wire to jump the starter. The car started and ran but the windows, door locks, turn signals, and stereo did not work. That's when we drove it to the mechanic.
After an hour they traced it down to the "fusible link from the alternator" they said it was fried and that it took some heavy amps to fry it....this is where my buddy let me know that when he started on the alternator he f*#@ked up and didn't disconnect the battery......

He disconnected it right after but we figure it was to late.
So we went and got a range of fusible links but for the life of me I can not track this thing down. I have taken the fuse box apart but I cant seem to find it. Anyone have any pics or diagrams?